This guide shows you how to configure and use multiple MCP servers simultaneously with mcp_use, enabling complex workflows that span different domains.

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Overview

Using multiple MCP servers allows your agent to access a diverse set of tools from different sources. For example, you might want to:
  • Web scraping with Playwright + File operations with filesystem server
  • Database queries with SQLite + API calls with HTTP server
  • Code execution with Python server + Git operations with GitHub server
The MCPClient can manage multiple servers, and the optional ServerManager can dynamically select the appropriate server for each task.

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Basic Multi-Server Configuration

Create a configuration file that defines multiple servers:
multi_server_config.json
{
  "mcpServers": {
    "playwright": {
      "command": "npx",
      "args": ["@playwright/mcp@latest"],
      "env": {
        "DISPLAY": ":1",
        "PLAYWRIGHT_HEADLESS": "true"
      }
    },
    "filesystem": {
      "command": "mcp-server-filesystem",
      "args": ["/safe/workspace/directory"],
      "env": {
        "FILESYSTEM_READONLY": "false"
      }
    },
    "sqlite": {
      "command": "mcp-server-sqlite",
      "args": ["--db", "/path/to/database.db"],
      "env": {
        "SQLITE_READONLY": "false"
      }
    },
    "github": {
      "command": "mcp-server-github",
      "args": ["--token", "${GITHUB_TOKEN}"],
      "env": {
        "GITHUB_TOKEN": "${GITHUB_TOKEN}"
      }
    }
  }
}

​
Using Multiple Servers

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Basic Approach (Manual Server Selection)

import asyncio
from langchain_openai import ChatOpenAI
from mcp_use import MCPAgent, MCPClient

async def main():
    # Load multi-server configuration
    client = MCPClient.from_config_file("multi_server_config.json")

    # Create agent (all servers will be connected)
    llm = ChatOpenAI(model="gpt-4")
    agent = MCPAgent(llm=llm, client=client)

    # Agent has access to tools from all servers
    result = await agent.run(
        "Search for Python tutorials online, save the best ones to a file, "
        "then create a database table to track my learning progress"
    )
    print(result)

if __name__ == "__main__":
    asyncio.run(main())

​
Advanced Approach (Server Manager)

Enable the server manager for more efficient resource usage: 
import asyncio
from langchain_openai import ChatOpenAI
from mcp_use import MCPAgent, MCPClient

async def main():
    client = MCPClient.from_config_file("multi_server_config.json")

    # Enable server manager for dynamic server selection
    agent = MCPAgent(
        llm=llm,
        client=client,
        use_server_manager=True,  # Only connects to servers as needed
        max_steps=30
    )

    # The agent will automatically choose appropriate servers
    result = await agent.run(
        "Research the latest AI papers, summarize them in a markdown file, "
        "and commit the file to my research repository on GitHub"
    )
    print(result)

if __name__ == "__main__":
    asyncio.run(main())

​
Configuration Patterns

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Web Scraping + Data Processing

{
  "mcpServers": {
    "playwright": {
      "command": "npx",
      "args": ["@playwright/mcp@latest"],
      "env": {
        "PLAYWRIGHT_HEADLESS": "true"
      }
    },
    "pandas": {
      "command": "mcp-server-pandas",
      "args": ["--allow-file-access"],
      "env": {
        "PANDAS_SAFE_MODE": "true"
      }
    },
    "filesystem": {
      "command": "mcp-server-filesystem",
      "args": ["/data/workspace"]
    }
  }
}
Usage example: 
result = await agent.run(
    "Scrape product data from example-store.com, "
    "clean and analyze it with pandas, "
    "then save the results as CSV and Excel files"
)

​
Development Workflow

{
  "mcpServers": {
    "filesystem": {
      "command": "mcp-server-filesystem",
      "args": ["/home/user/projects"]
    },
    "github": {
      "command": "mcp-server-github",
      "args": ["--token", "${GITHUB_TOKEN}"]
    },
    "python": {
      "command": "mcp-server-python",
      "args": ["--safe-mode"]
    },
    "git": {
      "command": "mcp-server-git",
      "args": ["--repo-path", "/home/user/projects"]
    }
  }
}
Usage example: 
result = await agent.run(
    "Create a new Python function to calculate fibonacci numbers, "
    "write unit tests for it, run the tests, "
    "and if they pass, commit the changes to the current git branch"
)

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Research and Documentation

{
  "mcpServers": {
    "playwright": {
      "command": "npx",
      "args": ["@playwright/mcp@latest"]
    },
    "arxiv": {
      "command": "mcp-server-arxiv",
      "args": ["--max-results", "10"]
    },
    "wikipedia": {
      "command": "mcp-server-wikipedia",
      "args": ["--language", "en"]
    },
    "filesystem": {
      "command": "mcp-server-filesystem",
      "args": ["/research/notes"]
    }
  }
}

​
Managing Server Dependencies

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Environment Variables

Use environment variables for sensitive information:
.env
GITHUB_TOKEN=ghp_...
DATABASE_URL=postgresql://user:pass@localhost/db
API_KEY=sk-...
WORKSPACE_PATH=/safe/workspace
Reference them in your configuration: 
{
  "mcpServers": {
    "github": {
      "command": "mcp-server-github",
      "env": {
        "GITHUB_TOKEN": "${GITHUB_TOKEN}"
      }
    },
    "filesystem": {
      "command": "mcp-server-filesystem",
      "args": ["${WORKSPACE_PATH}"]
    }
  }
}

​
Conditional Server Loading

You can conditionally include servers based on availability: 
import os
import asyncio
from mcp_use import MCPClient, MCPAgent

async def create_agent_with_available_servers():
    config = {"mcpServers": {}}

    # Always include filesystem
    config["mcpServers"]["filesystem"] = {
        "command": "mcp-server-filesystem",
        "args": ["/workspace"]
    }

    # Include GitHub server if token is available
    if os.getenv("GITHUB_TOKEN"):
        config["mcpServers"]["github"] = {
            "command": "mcp-server-github",
            "env": {"GITHUB_TOKEN": os.getenv("GITHUB_TOKEN")}
        }

    # Include database server if URL is available
    if os.getenv("DATABASE_URL"):
        config["mcpServers"]["postgres"] = {
            "command": "mcp-server-postgres",
            "env": {"DATABASE_URL": os.getenv("DATABASE_URL")}
        }

    client = MCPClient.from_dict(config)
    return MCPAgent(llm=ChatOpenAI(model="gpt-4"), client=client)

​
Performance Optimization

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Server Manager Benefits

The server manager provides several performance benefits: 
# Without server manager - all servers start immediately
agent = MCPAgent(llm=llm, client=client, use_server_manager=False)
# Result: All 5 servers start, consuming resources

# With server manager - servers start only when needed
agent = MCPAgent(llm=llm, client=client, use_server_manager=True)
# Result: Only the required servers start for each task

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Tool Filtering

Control which tools are available to prevent confusion: 
# Restrict to specific tool types
agent = MCPAgent(
    llm=llm,
    client=client,
    allowed_tools=["file_read", "file_write", "web_search"],
    disallowed_tools=["system_exec", "network_request"]
)

# Or filter by server
agent = MCPAgent(
    llm=llm,
    client=client,
    allowed_servers=["filesystem", "playwright"],
    use_server_manager=True
)

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Troubleshooting Multi-Server Setups

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Common Issues

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Debug Configuration

Enable comprehensive debugging: 
import logging
from mcp_use import MCPAgent, MCPClient

# Enable debug logging
logging.basicConfig(
    level=logging.DEBUG,
    format='%(asctime)s - %(name)s - %(levelname)s - %(message)s'
)

# Create client with debug mode
client = MCPClient.from_config_file(
    "multi_server_config.json",
    debug=True,
    timeout=30  # Increase timeout for debugging
)

# Create agent with verbose output
agent = MCPAgent(
    llm=llm,
    client=client,
    use_server_manager=True,
    debug=True,
    verbose=True
)

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Best Practices

Start Simple

Begin with 2-3 servers and add more as needed. Too many servers can overwhelm the LLM.

Use Server Manager

Enable use_server_manager=True for better performance and resource management.

Environment Variables

Store sensitive configuration like API keys in environment variables, not config files.

Error Handling

Implement graceful degradation when servers are unavailable or fail.

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Next Steps

Server Manager

Learn more about dynamic server selection and management

Security Guide

Best practices for secure multi-server configurations

Performance

Optimize your multi-server setup for better performance